Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919042.1_cds_XP_016468321.1_60972
CDS Infomation

[gene=LOC107790870] [db_xref=GeneID:107790870] [protein=uncharacterized protein LOC107790870] [protein_id=XP_016468321.1] [location=join(36070..36213,37326..37769,37854..37904,38223..38305,38951..39050,46073..46151,46562..46685,47161..47267,49429..49557,51299..51360,51465..51629,58807..58967,59110..59141,60261..60418,62754..62833,63424..63489,63700..63986,64260..64367,64974..65071,65426..65486,66023..66099,66211..66282,66429..66505,75764..75844,78259..78361,80586..80744,81191..81583)] [gbkey=CDS]
Sequence

ATGTCGGTATCGCATAGGATCGTTTACCCTTTCATTCTCAAATTATATTCTCCAATTCCT
CCTTCTAGAACCTTCCTCTTTTCTCAATCTCGTTCTCTCACGTTCAGTAGCTCGCTCTTC
GCTTCACCCATGCCGAACAATCAGAGAAGGGGTGGTCATAAAGAGAAAAGATGGCAAGTG
AGGCCAAGTTCCAACAGGTTAACAGGCTCGTCTTCAAATGGGGAACCTGTATCTGCTGCA
GCTACTGGAGCCATTACCAACCGTCTAAATTCCATGGATATTAGTGAAGGCGTTGCGCAG
TCTAGTGCTCCAGTGGCATCTCTTCAAGTTGGGAACGTTGGATTAGCAACCCAGTCACCT
GTACAGAATCAAAAAGTCATCTGGAAACCCAAATCATATGGAACAGTGTCTGGACCCCCA
ACAATTGAAGCTGAAAAAACATCAAATGAACAAAAGAATGCTAATTTAAGCAAATTATTC
AAGGGTAATTTATTGGAAAACTTTACTGTAGACAACTCAACATTTTCCAGAGCCCAAGTA
AGGGCTACTTTCTACCCAAAATTTGAGAATGAGAAGTCTGATCAGGAGATTAGGACAAGG
ATGATAGAGATGGTGTCCAAAGATCTGGCTACAATGGAGGTCTCACTTAAGCATTCTGGA
TCACTTTTTATGTATGCTGGGCATGCGGGTGGAGCATATGCCAAGAATAGCTTCGGGAAT
ATTTACACTGCTGTTGGTGTCTTTGTTCTTGGACGGATGTTTCGTGAGGCATGGGGTACT
CAAGCAAGCAAGAAGCAAGCAGAGTTCAATGAGTTTCTTGAGCGCAATCACATGTGCATA
TCAATGGAGTTGGTCACAGCAGTGTTGGGGGACCACGGACAACGCCCACGAGATGATTAT
GCGGTTGTGACTGCAGTCACGGAGTTGGGAAATGGAAAACCAAAGTTCTATTCAACTCCC
GATGTAATCGCTTTTTGCAGGGAATGGAGACTACCAACCAATCATGTATGGCTGTTCTCA
ACGAGGAAATCGGTGACTTCCTTCTTTGCTGCGTTTGATGCACTCTGCGAGGAAGGAACA
GCAACAACCGTTTGCCAGGCTCTTGACGAAGTTGCTGATATTTCTGTACCTGGATCAAAA
GACCATATAAAAGTGCAAGGTGAAATTTTGGAGGGCCTTGTGGCTCGCATTGTAAAGCGT
GAGAGCTCAGAGCACATGGAACGGGTTCTGAAAGATTTTCCTCCTCCGCCATTAGAGGGT
GAGGGCTTGGACCTGGGACCTACACTACGTGAAATTTGTGCTGCAAATAGATCAGAAAAG
CAGCAAATAAAGGCACTTCTTCAGAGTGCTGGCACGGCTTTCTGCCCGAATTATGTGGAC
TGGTTTGGAGATGAAGATTCTGGTTCACATTCAAAAAATGCTGATCGAGCTGCTGTCTCA
AAGTTCTTACAAGCACATCCTGCTGATTTTTCCACCAGAAAATTGCAGGAAATGGTTCGT
TTGATGAGGGAAAAGCGCTTTCCTGCTGCTTTCAAGTGTTACTATAACTTCCATAAAATT
AATGAGCTATCAAGTGACAACCTGCCATTCAAAATGGTGATCCATGTATATAGTGATTCA
GGCTTCCGCCGGTACCAGAAAGAGATGAGGCACAAACCAGGACTGTGGCCTTTGTATCGA
GGCTTTTTTGTCGACCTGGATTTATTCAAGGCCAATGAGGAGAAAGCTGCTGAAATGGTA
CAAAGTAGCAATCATATGGTAAAAAATGAGGAAGAGGACAGCAGTTTAGCTGATGAAGAT
GCAAATCTGATGGTTAAATTGAAATTTCTTACTTACAAGTTGAGAACTTTTTTGATCCGT
AATGGCTTGATGACTCTTTTCAAAGAAGGCCCTTCTGCGTACAAGGCTTATTACCTGAGG
CAAATGAAAATTTGGAATACTTCAGCAGCCAAGCAACGGGAACTCTGCAAGATGCTTGAT
GAATGGGCAGTATATATACGCAGAAAATATGGGAACAAACCATTGTCATCATCCACATAT
CTAAGTGAAGCTGAACCCTTCCTTGAACAATATTCAAAGCGTAGTCCACAAAATCAGGCT
TTGGTAGGATCTGCTGGAAATTTAGTCAAAGTTGAAGATTTCATGGCCATTGTTGAAGGA
CAAGATGAAGAGGGTGATCTCAAGCCGGAGAAAGATATTGCACCTTCAAGCCCTAGTATT
CCCAGCAAAGACATGGTCGCGAAGAATGAGGGTCTCATTGTTTTCTTTCCAGGAATACCA
GGTTGTGCTAAATCTGCACTTTGTAAGGAAATACTGAATGCTCCAGGAGGGCTTGGAGAT
GATCGACCAGTTCATAGTTTAATGGGTGATCTTATCAAAGGTAGATATTGGCAAAAAGTT
GCTGATGAACGCCGAAGAAAACCTTACTCGATCATGCTTGCTGATAAGAATGCACCAAAT
GAGGAAGTATGGAGACAGATTGAGAACATGTGCCTAAGCACCAAGGCATCTGCTATTCCA
GTTGTACCTGATTCAGAAGGAACTGAAATCAATCCATTCTCTGTTGATGCACTTGCGGTT
TTTACATTCCGAGTACTTCACCGAGTTAATCATCCGGGAAATCTTGACAAGTCATCTCCA
AATGCTGGATATGTGCTGCTAATGTTTTATCACCTTTATGAGGGAAAGAGTCGTCAGGAG
TTCGAGAGTGAGCTTATTGAACGTTTTGGCTCACTTGTCAGAATGCCTCTACTGAAACCT
GAAAGGTCTCCGCTACCAGATTCTGTGAGGTCTATTATTGAGGAGGGAATCAATCTGTAC
AAGCTTCACACAAACAAACATGGAAGATTGGAGTCTACAAAAGGGATATATGCAAAAGAG
TGGGTTAAATGGGAGAAGCAGTTGAGGGATATTCTACTTGGGAATGCTGACTATCTCAAT
TCAATACAGGTTCCATTTGAATTTGCTGTTAAAGAAGTCTTGAAACAACTGGGAGCTATT
GCGAGGGGTGAGTATGCAGCGCCTACTTCTGAGAAGAGGAAGCTAGGATCTATAGTGTTT
GCAGCTGTCAGCCTGGCAGTTCCAGAAATTCTTGGTCTTCTGAATGATCTAGCCCAGAAA
GATCCGAAGGTTGGCGCTTTCTTGAAGGACAAAAGCATAGAGAGCTGCATTACAAAGGCC
CATTTGACCCTGGCTCATAAGAGAAGTCATGGTGTCACTGCAGTTGCCAAGTATGGTTGC
TTTCTTCACCAAAAGGTGCCAGTAGAGGTGGCTGCTTTATTGTTCTCCGAAAAACTGGCT
GCACTAGAAGCAAAGCCTGGTTGTATTGAAGGTGAGAAGGTCGATTCTAAAAACGAATGG
CCTCATGTCACATTATGGACAGGGGAAGGAGTTGTAGCCAAAGATGCCAATACACTACCG
CAGTTACTTTCACAAGGGAAGGCTACTCGCATTGATATAAATCCACCAATCACTATAACT
GGCACTCTCGAATTCTTTTGA

Peptide Sequence

PEP ID

XP_016468321.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107790870 [Nicotiana tabacum]
Sequence

MSVSHRIVYPFILKLYSPIPPSRTFLFSQSRSLTFSSSLFASPMPNNQRRGGHKEKRWQV
RPSSNRLTGSSSNGEPVSAAATGAITNRLNSMDISEGVAQSSAPVASLQVGNVGLATQSP
VQNQKVIWKPKSYGTVSGPPTIEAEKTSNEQKNANLSKLFKGNLLENFTVDNSTFSRAQV
RATFYPKFENEKSDQEIRTRMIEMVSKDLATMEVSLKHSGSLFMYAGHAGGAYAKNSFGN
IYTAVGVFVLGRMFREAWGTQASKKQAEFNEFLERNHMCISMELVTAVLGDHGQRPRDDY
AVVTAVTELGNGKPKFYSTPDVIAFCREWRLPTNHVWLFSTRKSVTSFFAAFDALCEEGT
ATTVCQALDEVADISVPGSKDHIKVQGEILEGLVARIVKRESSEHMERVLKDFPPPPLEG
EGLDLGPTLREICAANRSEKQQIKALLQSAGTAFCPNYVDWFGDEDSGSHSKNADRAAVS
KFLQAHPADFSTRKLQEMVRLMREKRFPAAFKCYYNFHKINELSSDNLPFKMVIHVYSDS
GFRRYQKEMRHKPGLWPLYRGFFVDLDLFKANEEKAAEMVQSSNHMVKNEEEDSSLADED
ANLMVKLKFLTYKLRTFLIRNGLMTLFKEGPSAYKAYYLRQMKIWNTSAAKQRELCKMLD
EWAVYIRRKYGNKPLSSSTYLSEAEPFLEQYSKRSPQNQALVGSAGNLVKVEDFMAIVEG
QDEEGDLKPEKDIAPSSPSIPSKDMVAKNEGLIVFFPGIPGCAKSALCKEILNAPGGLGD
DRPVHSLMGDLIKGRYWQKVADERRRKPYSIMLADKNAPNEEVWRQIENMCLSTKASAIP
VVPDSEGTEINPFSVDALAVFTFRVLHRVNHPGNLDKSSPNAGYVLLMFYHLYEGKSRQE
FESELIERFGSLVRMPLLKPERSPLPDSVRSIIEEGINLYKLHTNKHGRLESTKGIYAKE
WVKWEKQLRDILLGNADYLNSIQVPFEFAVKEVLKQLGAIARGEYAAPTSEKRKLGSIVF
AAVSLAVPEILGLLNDLAQKDPKVGAFLKDKSIESCITKAHLTLAHKRSHGVTAVAKYGC
FLHQKVPVEVAALLFSEKLAALEAKPGCIEGEKVDSKNEWPHVTLWTGEGVVAKDANTLP
QLLSQGKATRIDINPPITITGTLEFF

Transcript Sequence

Gene sequence data has not been registered.